Building IC systems?

From: Josh Bembenek (jbembe@hotmail.com)
Date: Wed Jul 30 2003 - 15:13:00 EDT

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    The ability of systems to accumulate changes with Hsp90 and exhibit large
    variations due to stress is quite an interesting mechanism hypothesized to
    expand evolutionary pathways. This is one possible molecular mechanism that
    could support Gould’s staltutory evolutionary change models (mass acting
    RM&NS?). The following article deals with some parameters of this
    mechanism. Could this be part of the indirect mechanism capable of building
    IC in organisms?

    Nature 424, 549 - 552 (31 July 2003); doi:10.1038/nature01765

    Evolutionary capacitance as a general feature of complex gene networks

    AVIV BERGMAN1,2 AND MARK L. SIEGAL1

    1 Department of Biological Sciences, Stanford University, Stanford,
    California 94305-5020, USA
    2 Center for Computational Genetics and Biological Modeling, Stanford
    University, Stanford, California 94305-5020, USA

    Correspondence and requests for materials should be addressed to M.L.S.
    (mlsiegal@stanford.edu).

    An evolutionary capacitor buffers genotypic variation under normal
    conditions, thereby promoting the accumulation of hidden polymorphism. But
    it occasionally fails, thereby revealing this variation phenotypically. The
    principal example of an evolutionary capacitor is Hsp90, a molecular
    chaperone that targets an important set of signal transduction proteins.
    Experiments in Drosophila and Arabidopsis have demonstrated three key
    properties of Hsp90: (1) it suppresses phenotypic variation under normal
    conditions and releases this variation when functionally compromised; (2)
    its function is overwhelmed by environmental stress; and (3) it exerts
    pleiotropic effects on key developmental processes. But whether these
    properties necessarily make Hsp90 a significant and unique facilitator of
    adaptation is unclear. Here we use numerical simulations of complex gene
    networks, as well as genome-scale expression data from yeast single-gene
    deletion strains, to present a mechanism that extends the scope of
    evolutionary capacitance beyond the action of Hsp90 alone. We illustrate
    that most, and perhaps all, genes reveal phenotypic variation when
    functionally compromised, and that the availability of loss-of-function
    mutations accelerates adaptation to a new optimum phenotype. However, this
    effect does not require the mutations to be conditional on the environment.
    Thus, there might exist a large class of evolutionary capacitors whose
    effects on phenotypic variation complement the systemic, environment-induced
    effects of Hsp90.

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